典型文献
Transcriptome changes in seeds during coleorhiza hair formation in rice
文献摘要：
Coleorhiza hairs are hairlike structures in seeds of the grass family(Poaceae).The molecular mechanisms underlying its formation are largely unknown,study on this topic will expand our understanding of the effects of water status on germination during rice(Oryza sativa L.)direct seeding.Seeds of Nipponbare were treated under two water conditions:in one,half of the seed surface was immersed in water and the other half was embryo side in air(EIA),and in the other,the whole seed was covered by water(CBW).Coleorhiza hairs formed only in EIA samples.Transcriptomics was used to identify the gene reg-ulation during coleorhiza hair formation in EIA(vs.CBW)embryos and endosperm.Embryos displayed more transcriptome modulation even though smaller in size than the endosperm.Differentially expressed genes(DEGs)were enriched in both primary and secondary metabolism and showed changes in abscisic acid,auxin,jasmonic acid,and salicylic acid signatures.Metabolites enrichment data were positively correlated with gene expression changes in the affected metabolic functional pathways.The presence of shorter coleorhiza hairs in an OsRHL1(Os06g0184000,a coleorhiza hair formation regulation candidate gene)knockout mutant suggested that root hair-associated DEGs share molecular regulators that control the formation of coleorhiza hairs.
文献关键词：
中图分类号：
作者姓名：
Tao Song;A.N.M.Rubaiyath Bin Rahman;Debatosh Das;Neng-Hui Ye;Feng Yang;Fu-Yuan Zhu;Mo-Xian Chen;Jian-Hua Zhang
作者机构：
Co-Innovation Center for Sustainable Forestry in Southern China,College of Biology and the Environment,Nanjing Forestry University,Nanjing 210037,Jiangsu,China;Shenzhen Research Institute,The Chinese University of Hong Kong,Shenzhen 518057,Guangdong,China;Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China,College of Agriculture,Hunan Agricultural University,Changsha 410128,Hunan,China;Department of Biology,Hong Kong Baptist University,Kowloon 999077,Hong Kong,China;CAS Key Laboratory of Quantitative Engineering Biology,Shenzhen Institute of Synthetic Biology,Shenzhen Institutes of Advanced Technology,Chinese Academy of Sciences,Shenzhen 518055,Guangdong,China;School of Life Sciences and State Key Laboratory of Agrobiotechnology,The Chinese University of Hong Kong,Shatin 999077,Hong Kong,China
文献出处：
引用格式：
[1]Tao Song;A.N.M.Rubaiyath Bin Rahman;Debatosh Das;Neng-Hui Ye;Feng Yang;Fu-Yuan Zhu;Mo-Xian Chen;Jian-Hua Zhang-.Transcriptome changes in seeds during coleorhiza hair formation in rice)[J].作物学报（英文版）,2022(03):692-703
A类：
coleorhiza,Coleorhiza,hairlike,OsRHL1,Os06g0184000
B类：
Transcriptome,changes,seeds,during,formation,rice,hairs,structures,grass,family,Poaceae,molecular,mechanisms,underlying,its,largely,unknown,study,this,topic,will,expand,our,understanding,effects,water,status,germination,Oryza,sativa,direct,seeding,Seeds,Nipponbare,were,treated,two,conditions,one,half,surface,was,immersed,other,side,EIA,whole,covered,by,CBW,formed,only,samples,Transcriptomics,used,identify,embryos,endosperm,Embryos,displayed,more,transcriptome,modulation,even,though,smaller,size,than,Differentially,expressed,genes,DEGs,enriched,both,primary,secondary,metabolism,showed,abscisic,acid,auxin,jasmonic,salicylic,signatures,Metabolites,enrichment,data,positively,correlated,expression,affected,metabolic,functional,pathways,presence,shorter,regulation,candidate,knockout,mutant,suggested,that,root,associated,share,regulators,control
AB值：
0.550741
相似文献
机标中图分类号，由域田数据科技根据网络公开资料自动分析生成，仅供学习研究参考。
